Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MEARNQTAISKFLLLGLIEDPELQPVLFSLFLSMYLVTILGNLLILLAVISDSHLHTPMYFFLSNLSFLDICLSTTTIPKMLVNIQAQNRSITYSGCLTQICFVLFFAGLENCLLAAMAYDRYVAICHPLRYT-VIMNPRLCGLLILLSLLTSVVNALLLSLMVLRLSFCTDLEIPLFFCELAQVIQLTC--SDTLINNILIYFA--ACIFGGVPLSGIILSYTQITSCVLR---------MPSASGK---HKAVSTCGSHLSIVLLFYGAGLGVYISSVVT-------DSPRKTAVASVMYSVFPQMVNPFIYSLRNKDMKGTLRKFIGRIPSLLWCAICFGFRFLE |
| 3RFM Chain:A ((8-303)) | -------------------------VYITVELAIAVLAILGNVLVCWAVWLNSNLQNVTNYFVVSLAAADILVGVLAIP-FAITISTGFCAACH-GCLFIACFVLVLAQSSIFSLLAIAIDRYIAIAIPLRYNGLVTGTRAAGIIAICWVLSFAIG---LTPM-LGWNNCGQP--------GCGEGQVACLFEDVVPMNYMVYFNFFACVL--VPLLLMLGVYLRIFAAARRQLKQMESQPLPGERARSTLQKEVHAAKSAAIIAGLFALCWLPLHIINCFTFFCPDCSHAPLWLMYLAIVLAHTNSVVNPFIYAYRIREFRQTFRKIIRS----------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3RFM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -283233 for 2040 contacts (-138.8/contact) +
2D Compatibility (PS) -26031 + (NN) 1487 + (LL) 4452
1D Compatibility (HY) -25600 + (ID) 4050
Total energy: -332975.0 ( -163.22 by residue)
QMean score : 0.341
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