Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSGENNSSVTEFILAGLSEQPELQLPLFLLFLGIYVVTVVGNLGMTTLIWLSSHLHTPMYYFLSSLSFIDFCHSTVITPKMLVNFVTEKNIISYPECMTQLYFFLVFAIAECHMLAAMAYDRYMAICSPLLYSVIISNKACFSLILGVYI----IGLV-------CASVHTGCMFRVQFCKFDLINHYFCDLLPLLKLSCSSIYVNKLLILCVGAFNILVPSLTILCSYIFIIASI-LHIRSTEGR----SKAFSTCSSHMLA---VVIFFGSAAFMYLQPSSIS-------SMDQGKVSSVFYTIIVP----MLNPLIYSLRNKDVHVSLKKMLQRRTLL |
3RFM Chain:A ((14-305)) | -------------------------------LAIAVLAILGNVLVCWAVWLNSNLQNVTNYFVVSLAAADILVGVLAIPFAIT--ISTGFCAACHGCLFIACFVLVLAQSSIFSLLAIAIDRYIAIAIPLRYNGLVTGTRAAGIIAICWVLSFAIGLTPMLGWNNCGQP---------GCGEGQVACLFEDVVPMNYM----VYFN--FFACV-----LVPLLLMLGVYLRIFAAARRQLKQMESQPLPGERARSTLQKEVHAAKSAAIIAGLFALCWLPLHIINCFTFFCPDCSHAPLWLMYLAIVLAHTNSVVNPFIYAYRIREFRQTFRKIIRS---- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3RFM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -257139 for 1837 contacts (-140.0/contact) +
2D Compatibility (PS) -25042 + (NN) 3718 + (LL) 3916
1D Compatibility (HY) -26000 + (ID) 3450
Total energy: -303997.0 ( -165.49 by residue)
QMean score : 0.222
|
|
|