Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTEVLWPAVPNGTDAAFLAGPGSSWGNSTVASTAAVSSSFKCALTKTGFQFYYLPAVYILVFIIGFLGNSVAIWMFVFHMKPWSGISVYMFNLALADFLYVLTLPALIFYYFNKTDWIFGDAMCKLQRFIFHVNLYGSILFLTCISAHRYSGVVYPLKSLGRLKKKNAICISVLVWLIVVVAISPILFYSGTGVRKNKTITCYDTTSDEYLRSYFIYSMCTTVAMFCVPLVLILGCYGLI------VRALIYKDLDNSPLRRKSIYLVIIVLTVFAVSYIPFH---VMKTMNLRARLDFQTPAMCAFNDRVYATYQVTRGLASLNSCVDPILYFLAGDTFRRRLSRATRKASRRSEANLQSKSEDMTLNILPEFKQNGDTSL |
| 5C1M Chain:A ((22-294)) | -------------------------------------------------------ALYSIVCVVGLFGNFLVMYVIVRYTKMKTATNIYIFNLALADALATSTLPFQSVNYLMGT-WPFGNILCKIVISIDYYNMFTSIFTLCTMSVDRYIAVCHPVKALDFRTPRNAKIVNVCNWILSSAIGLPVMFMATTKYRQG-SIDCTLTFSHPTWYWENLLKICVFIFAFIMPVLIITVCYGLMILRLKSVRMLSGSKEKDRNLRRIT-RMVLVVVAVFIVCWTPIHIYVIIKALITIPETTFQT-----------VSWHFCIALGYTNSCLNPVLYAFLDENFKRCF-------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 5C1M.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -240435 for 1935 contacts (-124.3/contact) +
2D Compatibility (PS) -26020 + (NN) 1365 + (LL) 5924
1D Compatibility (HY) -25200 + (ID) 4250
Total energy: -288616.0 ( -149.16 by residue)
QMean score : 0.231
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