Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTVLAPAWSPTTYLLLLLLLSSGLSGTQDCSFQHSPISSDFAVKIRELSDYLLQDYPVTVASNLQDEELCGGLWRLVLAQRWMERLKTVAGSKMQGLLERVNTEIHFVTKCAFQPPPSCLRFVQTNISRLLQETSEQLVALKPWITRQNFSRCLELQCQPDSSTLPPPWSPRPLEATAPTAPQPPLLLLLLLPVGLLLLAAAWCLHWQRTRRRTPRPGEQVPPVPSPQDLLLVEH
1ETE Chain:A ((1-134))
--------------------------TQDCSFQHSPISSDFAVKIRELSDYLLQDYPVTVASNLQDDELCGGLWRLVLAQRWMERLKTVAGSKMQGLLERVNTEIHFVTKCAFQPPPSCLRFVQTNISRLLQETSEQLVALKPWITRQNFSRCLELQCQP---------------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1ETE.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -93484 for 959 contacts (-97.5/contact) +
2D Compatibility (PS) -14542 + (NN) -10497 + (LL) 5980
1D Compatibility (HY) -20400 + (ID) 6650
Total energy: -139593.0 ( -145.56 by residue)
QMean score : 0.593
(partial model without unconserved sides chains):
PDB file :
Tito_1ETE.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1ETE-query.scw
PDB file :
Tito_Scwrl_1ETE.pdb
: