Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MEGISNFKTPSKLSEKKKSVLCSTPTINIPASPFMQKLGFGTGVNVYLMKRSPRGLSHSPWAVKKINPICNDHYRSVYQKRLMDEAKILKSLHHPNIVGYRAFTEANDGSLCLAMEYGGEKSLNDLIEERYKASQDPFP---AAIILKVALNMARGLKYLH--QEKKLLHGDIKSSNVVIKGDFETIKICDVGVSLPLDENMTVTDPEACYIGTEPWKPKEAVEENGVITDKADIFAFGLTLWEMMTLSIPHINLSNDDDDEDKTFDESDFDDEAYYAAL--GTRPPINMEELDESYQKVIE-LFSVCTNEDPKDRPSAAHIVEALETDV |
4L3P Chain:A ((46-259)) | ------------------------------------------------------------------------------RKAFIVELRQLSRVNHPNIV---KLYGACLNPVCLVMEYAEGGSLYNVLH-----GAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFG-------------GSAAWMAPE-------VFEGSNYSEKCDVFSWGIILWEVIT--------------RRKPFDEIGGPAFRIMWAVHNGTRPP-----LIKNLPKPIESLMTRCWSKDPSQRPSMEEIVKIMTHLM |
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General information:
TITO was launched using:
| RESULT:
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Template: 4L3P.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -81515 for 1422 contacts (-57.3/contact) +
2D Compatibility (PS) -21586 + (NN) -20493 + (LL) 5828
1D Compatibility (HY) -19600 + (ID) 3600
Total energy: -140966.0 ( -99.13 by residue)
QMean score : 0.449
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