Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MPGKQSEEGPAEAGASEDSEEEGLGGLTLEELQQGQEAARALEDMMTLSAQTLVRAEVDELYEEVRPLGQGCYGRVLLVTHRQKGTPLALKQLPKPRTSLRGFLYEFCVGLSLGAHSAIVTAYGIGIESAHSYSFLTEPVLHGDLMAFIQPKVGLPQPAVHRCAAQLASALEYIHARGLVYRDLKPENVLVCDPACRRFKLTDFG-----HTRPRGTLLRLAGPPIPYTAPELCAPPPLPEGLPIQPALDAWALGVLLFCLLTGYFPWDRPLAEADPFYEDFLIWQASGQPRDRPQPWFGLAAAADALLRGLLDPHPRRRSAVIAIREHLGRPWRQREGEAEAVGAVEEEAGQ |
2R0U Chain:A ((7-261)) | -----------------------------------------------------------EDWDLVQTLGE---GEVQLAVNRVTEEAVAVKIVDMK-----NIKKEICINKMLN-HENVVKFYGHRREGNIQYLFL-EYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERD--NLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK----RREFHAEP-VDVWSCGIVLTAMLAGELPWDQP-SDSCQEYSD---WK---EKKTYLNPWKKIDSAPLALLHKILVENPSARITIPDIKKDRWYNKPLKKGAKRPRVTS------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 2R0U.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -140244 for 1796 contacts (-78.1/contact) +
2D Compatibility (PS) -25949 + (NN) -23018 + (LL) 5260
1D Compatibility (HY) -17200 + (ID) 3950
Total energy: -205101.0 ( -114.20 by residue)
QMean score : 0.369
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