Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
LSCGQVDSKLAPCVSYVTGKAPSISKECCSGVQGLNGLARSSPDRKIACRCLKSLATSIKSINMDKVSGVPGKCGVSVPFPISMSTNCNNVN
1L6H Chain:A ((1-69))
AGC--NAGQLTVCTGAIAGGARP-TAACCSSLRAQQGCFCQFAKDP-------RYGRYVNSPNARKA---VSSCGIALP-------TCH---
General information:
TITO was launched using:
RESULT:
Template:
1L6H.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -19657 for 524 contacts (-37.5/contact) +
2D Compatibility (PS) -7294 + (NN) -3533 + (LL) 1376
1D Compatibility (HY) -2400 + (ID) 800
Total energy: -32308.0 ( -61.66 by residue)
QMean score : 0.220
(partial model without unconserved sides chains):
PDB file :
Tito_1L6H.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1L6H-query.scw
PDB file :
Tito_Scwrl_1L6H.pdb
: