Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
--------AEAEAAAEVSCGDAVSALIPCGSFLVGAVAGAPSESCCRGAQGLRRMAGTPGARRALCRCLEQ-SGPSFGVLPDRARQLPALCKLGISIPVSPHTD-CDKIQ
2OY9 Chain:A ((6-89))
TLPISLDWSTEEVIDVVHFFQAIEQAYD---------QGIAREDLLGKYRRFKEIVPSKSEEKQLFRAYEQENDVSCYQTIKKARE-----------------EMEEHIQ
General information:
TITO was launched using:
RESULT:
Template:
2OY9.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -18396 for 465 contacts (-39.6/contact) +
2D Compatibility (PS) -8109 + (NN) -3721 + (LL) 1360
1D Compatibility (HY) -3200 + (ID) 700
Total energy: -32766.0 ( -70.46 by residue)
QMean score : 0.348
(partial model without unconserved sides chains):
PDB file :
Tito_2OY9.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2OY9-query.scw
PDB file :
Tito_Scwrl_2OY9.pdb
: