Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
--VVQCGQVTQLMAPCMPYLSGAPGMTPYGICCNSLGVLNQLAA----STADRVAACNCVKAAASGFPAVDFSRAAALPAACGLAIN----------FAVTPNMDCNQVTDEP----------
3DD7 Chain:A ((1-123))
MRHISPEELIALHDANISRYGGLPGMSDPGRAEAIIGRVQARVAYEEITDLFEVSATYLVATARGYIFNDANKRTALNSALLFLRRNGVQVFDSPELADLTVGAATGEISVSSVADTLRRLYG
General information:
TITO was launched using:
RESULT:
Template:
3DD7.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -55771 for 714 contacts (-78.1/contact) +
2D Compatibility (PS) -10249 + (NN) -2631 + (LL) 0
1D Compatibility (HY) 1200 + (ID) 900
Total energy: -68351.0 ( -95.73 by residue)
QMean score : 0.201
(partial model without unconserved sides chains):
PDB file :
Tito_3DD7.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3DD7-query.scw
PDB file :
Tito_Scwrl_3DD7.pdb
: