Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
ATCNALQLTPCAGAIIGSA--APTASCCSKMKEQQ-PCMCQYARDPNLKQY-VDSPNGKKVMAACKVPVP-SC
2RKN Chain:A ((9-77))
----QDELNECKPAVSKENPTSPSQPCCTALQHADFACLCGYKNSPWLGSFGVDPELASALPKQCGLANAPTC
General information:
TITO was launched using:
RESULT:
Template:
2RKN.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -17874 for 378 contacts (-47.3/contact) +
2D Compatibility (PS) -6181 + (NN) -1330 + (LL) 172
1D Compatibility (HY) -5200 + (ID) 750
Total energy: -31163.0 ( -82.44 by residue)
QMean score : 0.288
(partial model without unconserved sides chains):
PDB file :
Tito_2RKN.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2RKN-query.scw
PDB file :
Tito_Scwrl_2RKN.pdb
: