Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
AGEC--GRSSPDN------EAMKLAPCAGAAQDANSAVPGGCCTQIKRFSQNPKCLCAILLSDTAKASGVDPEV----------------ALTIPKRCNF--------ANRPVGYKCGAYTLP
1HSS Chain:A ((5-124))
--MCYPGQAFQVPALPACRPLLRLQCNGS--QVP-EAVLRDCCQQLAHISEWCRCGALYSMLDS--MYKEH---GAFPRCRREVVKLTAASITA--VCRLPIVVDASGDGAYVCKDVAAYPDA
General information:
TITO was launched using:
RESULT:
Template:
1HSS.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -23870 for 462 contacts (-51.7/contact) +
2D Compatibility (PS) -8291 + (NN) -4878 + (LL) 468
1D Compatibility (HY) -3600 + (ID) 850
Total energy: -41021.0 ( -88.79 by residue)
QMean score : 0.185
(partial model without unconserved sides chains):
PDB file :
Tito_1HSS.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1HSS-query.scw
PDB file :
Tito_Scwrl_1HSS.pdb
: