Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
---------------LSCGVVAGDLAQCLTYLKKGGRVPPACCKGVVALKSAAKTTQDRQDACNCMKQTASKVGGVNAGFAAALPRLCKVNIAYKISTSTNCTSIK-
2OCC Chain:E ((5-109))
HETDEEFDARWVTYFNKPDIDAWELRKGMNTLVGYDLVPE--PKIIDAALRACRRLNDFASAVRILEVVKDKAGPHKEIYPYVIQELRPTLNELGISTPEELGLDKV
General information:
TITO was launched using:
RESULT:
Template:
2OCC.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -26892 for 596 contacts (-45.1/contact) +
2D Compatibility (PS) -9510 + (NN) -4388 + (LL) 200
1D Compatibility (HY) -400 + (ID) 850
Total energy: -41840.0 ( -70.20 by residue)
QMean score : 0.436
(partial model without unconserved sides chains):
PDB file :
Tito_2OCC.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2OCC-query.scw
PDB file :
Tito_Scwrl_2OCC.pdb
: