Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
VTCGQVASGLASCIPYLKTGGTPPPKCCSGVKAIKSLAITPADRKTICGCLKSGYSSSY-NPSLAASLPGKCGVSVPYKISPDTDCSKVQ
1L6H Chain:A ((1-69))
AGC--NAGQLTVCTGAIAGGARPTAACCSSLRAQQGC---------FCQFAKDPRYGRYVNSPNARKAVSSCGIALPT-------CH---
General information:
TITO was launched using:
RESULT:
Template:
1L6H.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -46014 for 506 contacts (-90.9/contact) +
2D Compatibility (PS) -7061 + (NN) -3043 + (LL) 868
1D Compatibility (HY) -2400 + (ID) 950
Total energy: -58600.0 ( -115.81 by residue)
QMean score : 0.355
(partial model without unconserved sides chains):
PDB file :
Tito_1L6H.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1L6H-query.scw
PDB file :
Tito_Scwrl_1L6H.pdb
: