Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ---------ADAGAGAACEPAQLAVCASAILGGTKPSGECCGNLRAQQG-CLCQYVKDPNYGHYVSSPHARDTLNLCGIPVPHC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
| 4DTH Chain:A ((12-367)) | ATPDFPTHFPKSSIGIENELAGLVVAMP------ANSAQKFGYVKSAQGDALFMLTKDMNQGSYQRPPSLQDGKNYQNWQTHTVELVSYPCEMDDKAAVETRKQAMLWLATHFTTHIDQSNHQPLAPIQSEDGRFVIEITNAKHVIAAGNGISAESQGQTITMTPSGQQATVGVAAKGFGTSATPELRLLESAPWYQKSLKSQFASLTSAENLDDKELAANVFAYLTSIYLKTAELAKKFGIYINEWDPMSEQITPNANGLTDPKVKNAWEILPRTKPSKIVEILSKSDAKAVMKHIKPQLQSRYSESLSKNVFQYFQDGGEVAGHGINNATVGDKHSPELAILFEFRTVPNELQSYLPKTE |
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General information:
TITO was launched using:
| RESULT:
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Template: 4DTH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -10726 for 319 contacts (-33.6/contact) +
2D Compatibility (PS) -7078 + (NN) 822 + (LL) 232
1D Compatibility (HY) -400 + (ID) 900
Total energy: -18050.0 ( -56.58 by residue)
QMean score : 0.182
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