Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
DTSPSQCKEERNLLVNACRPVIYG--RSPSADCCQRVR--------VSHVECVCPYVTPKTASIIGVIGVDNVVKKIEGCGRTVPRKFK------CGSITTP
1BWO Chain:A ((1-90))
----IDCGHVDSLV-RPCLSYVQGGP-GPSGQCCDGVKNLHNQARSQSDRQSACNCLKGIARGIHNLN-EDNARSIPPKCG--VNLPYTISLNIDCSRV---
General information:
TITO was launched using:
RESULT:
Template:
1BWO.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -25881 for 461 contacts (-56.1/contact) +
2D Compatibility (PS) -7445 + (NN) 838 + (LL) 44
1D Compatibility (HY) -3200 + (ID) 900
Total energy: -36544.0 ( -79.27 by residue)
QMean score : 0.155
(partial model without unconserved sides chains):
PDB file :
Tito_1BWO.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1BWO-query.scw
PDB file :
Tito_Scwrl_1BWO.pdb
: