Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
---------------------------------------------QCGGSFVDIEAQCSQFVHKTGPKTPPSLGCCQVVKTLNVNCVCRFVTPQVEAM----ISMEKVVYVA----RTCGVTVRAGTQCGKFKFLAMPIFQG
1K6K Chain:A ((1-142))
MLNQELELSLNMAFARAREHRHEFMTVEHLLLALLSNPSAREALEACSVDLVALRQELEAFIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQAAYLLRKHEVSRLDVVNFISHGT
General information:
TITO was launched using:
RESULT:
Template:
1K6K.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -25856 for 466 contacts (-55.5/contact) +
2D Compatibility (PS) -9449 + (NN) -3156 + (LL) 0
1D Compatibility (HY) -2800 + (ID) 600
Total energy: -41861.0 ( -89.83 by residue)
QMean score : 0.206
(partial model without unconserved sides chains):
PDB file :
Tito_1K6K.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1K6K-query.scw
PDB file :
Tito_Scwrl_1K6K.pdb
: