Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
QAGGCASQLGNLNVCAPYVVPGAVNTNPSQECCAALSGVNH----------DCMCNT----------LRVASQLPSSCNLAALNCGN
1AFH Chain:A ((2-77))
--ISCGQVASAIAPCISYARGQG--SGPSAGCCSGVRSLNNAARTTADRRAACNCLKNAAAGVSGLNAGNAASIPSKCGV-------
General information:
TITO was launched using:
RESULT:
Template:
1AFH.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -29211 for 381 contacts (-76.7/contact) +
2D Compatibility (PS) -5830 + (NN) -4125 + (LL) 564
1D Compatibility (HY) -2400 + (ID) 700
Total energy: -41702.0 ( -109.45 by residue)
QMean score : 0.336
(partial model without unconserved sides chains):
PDB file :
Tito_1AFH.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1AFH-query.scw
PDB file :
Tito_Scwrl_1AFH.pdb
: