Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
QNCSAAIGELMTCGPYVLPGNNGAPSEQCCSALRAVNH----------GCLCET----------INIISSLPDHCSLPAVNCAS
1AFH Chain:A ((3-77))
-SCGQVASAIAPCISYARGQG-SGPSAGCCSGVRSLNNAARTTADRRAACNCLKNAAAGVSGLNAGNAASIPSKCGV-------
General information:
TITO was launched using:
RESULT:
Template:
1AFH.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -31805 for 371 contacts (-85.7/contact) +
2D Compatibility (PS) -5752 + (NN) -3787 + (LL) 328
1D Compatibility (HY) -2000 + (ID) 750
Total energy: -43766.0 ( -117.97 by residue)
QMean score : 0.414
(partial model without unconserved sides chains):
PDB file :
Tito_1AFH.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1AFH-query.scw
PDB file :
Tito_Scwrl_1AFH.pdb
: