Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
ACAATTSLLA-CLPATQSDIMPSATCCTQLSSYVA--NNG----QDCLCSASTSNT---ARSDLALKLPQKCNLKFK----AGTTCNVIPGGQ
1BWO Chain:A ((3-89))
-CGHVDSLVRPCLSYVQGGPGPSGQCCDGVKNLHNQARSQSDRQSACNCLKGIARGIHNLNEDNARSIPPKCGVNLPYTISLNIDCSR-----
General information:
TITO was launched using:
RESULT:
Template:
1BWO.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -27163 for 439 contacts (-61.9/contact) +
2D Compatibility (PS) -7343 + (NN) -1456 + (LL) -16
1D Compatibility (HY) -3600 + (ID) 900
Total energy: -40478.0 ( -92.21 by residue)
QMean score : 0.487
(partial model without unconserved sides chains):
PDB file :
Tito_1BWO.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1BWO-query.scw
PDB file :
Tito_Scwrl_1BWO.pdb
: