Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
-ACSTDLSPYKPCLPAVMGTTPPSPTKECCIAVKSADILCLCEAVGTTELPG-LNKEAALTLPQRCGAVAFSTRVCGSK
1L6H Chain:A ((1-69))
AGCNA--GQLTVCTGAIAGGARPT--AACCSSLRAQQ-GCFCQFAKDPRYGRYVNSPNARKAVSSCGIALPTCH-----
General information:
TITO was launched using:
RESULT:
Template:
1L6H.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -31773 for 495 contacts (-64.2/contact) +
2D Compatibility (PS) -6922 + (NN) -4846 + (LL) 328
1D Compatibility (HY) -1600 + (ID) 650
Total energy: -45463.0 ( -91.84 by residue)
QMean score : 0.259
(partial model without unconserved sides chains):
PDB file :
Tito_1L6H.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1L6H-query.scw
PDB file :
Tito_Scwrl_1L6H.pdb
: