Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
AGECG---RVPVD-----RTALKLAPCAAATQNPRAAVPPSCCAQVRGIGRNPKCLCAVMLSNTA------------RQAGVKPAVAMTIPKRCAI--------ANRPIGYKCGPYTLP
1HSS Chain:A ((5-124))
--MCYPGQAFQVPALPACRPLLRLQCNGS--QVP-EAVLRDCCQQLAHISEWCRCGALYSMLDS-MYKEHGAFPRCRREVVKLTAASITA--VCRLPIVVDASGDGAYVCKDVAAYPDA
General information:
TITO was launched using:
RESULT:
Template:
1HSS.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -38356 for 537 contacts (-71.4/contact) +
2D Compatibility (PS) -8808 + (NN) -5196 + (LL) 336
1D Compatibility (HY) -4000 + (ID) 950
Total energy: -56974.0 ( -106.10 by residue)
QMean score : 0.316
(partial model without unconserved sides chains):
PDB file :
Tito_1HSS.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1HSS-query.scw
PDB file :
Tito_Scwrl_1HSS.pdb
: