Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
AGECGNASPDTEAWKLAPCAAAAQNE-------KAAPSKSCCLQVKKIGQNPDCLCAVMLSNTAKS------------SGIAPEVAVTIPKR-CNL--------ADRPVGYKCGAYTLP
1HSS Chain:A ((5-124))
--MC-YPGQAFQVPALPACRPLLRLQCNGSQVP-EAVLRDCCQQLAHI--SEWCRCGALYSMLDS-MYKEHGAFPRCRREVVKLTAASITA-VCRLPIVVDASGDGAYVCKDVAAYPDA
General information:
TITO was launched using:
RESULT:
Template:
1HSS.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -31586 for 580 contacts (-54.5/contact) +
2D Compatibility (PS) -8865 + (NN) -6867 + (LL) -116
1D Compatibility (HY) -4000 + (ID) 900
Total energy: -52334.0 ( -90.23 by residue)
QMean score : 0.000
(partial model without unconserved sides chains):
PDB file :
Tito_1HSS.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1HSS-query.scw
PDB file :
Tito_Scwrl_1HSS.pdb
: