Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
IPICNIETNDLVKCHPAFTGXNNPPPPGPDCCALVRA--------ANLQ--CLCPYKPYLSRF-GIDPSKVRPLLTRCGVNTPPSCF
1SIY Chain:A ((2-78))
--TCGQVQGNLAQCIGFLQKG---GVVPPSCCTGVKNILNSSRTTADRRAVCSCL-KAAAGAVRGINPNNAEALPGKCGVNIP----
General information:
TITO was launched using:
RESULT:
Template:
1SIY.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -26790 for 431 contacts (-62.2/contact) +
2D Compatibility (PS) -6641 + (NN) -2461 + (LL) -124
1D Compatibility (HY) -1600 + (ID) 1000
Total energy: -38616.0 ( -89.60 by residue)
QMean score : 0.000
(partial model without unconserved sides chains):
PDB file :
Tito_1SIY.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1SIY-query.scw
PDB file :
Tito_Scwrl_1SIY.pdb
: