Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKEQKCLFVTIAGLPNAGKSTLINSITGKKIAIVTPKVQTTRTQIRGIAIYNETQIIFTDSPGIFSAETKLEKALVKSAWSAIKGD-DVILLLIDASSYLKNIERIKTIFTRLRHTKTKCIFVINKIDLVKK-----PELKMTYKHLDLLYKLKKIFTISALKSDGLSDLMDYLSEVAPVSPWFYGEDQVTDSSTSFLSAEITREKLFLNLREELPYSTAVITEQFEEKKDESLVIKQVIFVLKDSHKKIVLGKGGSNIKKIGIEARIELEKLFERKVHLFLFVKVRP-WTD-----RPEEYIDDV |
3IEU Chain:A ((8-296)) | -----CGFIAIVGRPNVGKSTLLNKLLGQKISITSRKAQTTRHRIVGIHTEGAYQAIYVDTPGLHMEEKRAINRLMNKAASSSIGDVELVIFVVEGTRWTPDDE---MVLNKLREGKAPVILAVNKVDNVQEKADLLPHLQFLASQMNFL----DIVPISAETGLNVDTIAAIVRKHLPEATHHFPEDYITDRSQRFMASEIIREKLMRFLGAELPYSVTVEIERFVSNERGGYDINGLILVEREGQKKMVIGNKGAKIKTIGIEARKDMQEMFEAPVHLELWVKVKSGWADDERALRSLG----- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3IEU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -180517 for 2057 contacts (-87.8/contact) +
2D Compatibility (PS) -30646 + (NN) -12333 + (LL) 1660
1D Compatibility (HY) -20000 + (ID) 5050
Total energy: -246886.0 ( -120.02 by residue)
QMean score : 0.524
|
|
|