Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MFPKKVLGEEWEEGRKFNKLYQKDKQRKLIKRQGILRESQNGIQVYKEDPEIVEIAKPIGKWTQMVMQDGGLMQRLAQLMKRESGRKGFWELFVEAQASTHGKHKGKGR
4PRS Chain:A ((174-208))
------------------------KNPDLVISSGVLSSEQYGIAVRKEDTDLLEFINSVLRELKKSPYDVLIEKWFS--------------------------------
General information:
TITO was launched using:
RESULT:
Template:
4PRS.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -3230 for 116 contacts (-27.8/contact) +
2D Compatibility (PS) -3458 + (NN) 1069 + (LL) 3988
1D Compatibility (HY) -3600 + (ID) 600
Total energy: -5831.0 ( -50.27 by residue)
QMean score : 0.488
(partial model without unconserved sides chains):
PDB file :
Tito_4PRS.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4PRS-query.scw
PDB file :
Tito_Scwrl_4PRS.pdb
: