Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MGAACRGYCRKIYLA--IDNVLYAINETMVMWKKELKSLVKGNPTIFNDKLAISTLDDCLYMLDMRMIVQSGPIISPVIMIVTK
3S4W Chain:A ((646-713))
LGACVLTQGSQIFLQEPLDHLLSCIQHCLAWYKSRVVP-----------EELYSELDDMLESITVRMIKSELEDFELDKSADFS
General information:
TITO was launched using:
RESULT:
Template:
3S4W.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -22387 for 231 contacts (-96.9/contact) +
2D Compatibility (PS) -5603 + (NN) -2186 + (LL) 272
1D Compatibility (HY) -5600 + (ID) 800
Total energy: -36304.0 ( -157.16 by residue)
QMean score : 0.225
(partial model without unconserved sides chains):
PDB file :
Tito_3S4W.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3S4W-query.scw
PDB file :
Tito_Scwrl_3S4W.pdb
: