Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MWFYKLPSTNILDTQLTDVTTAPVVKLNILIITSNSTVVPVDVELGNLLCLQVMQARNISDGIMWGYTGAVILHVI
4W7J Chain:A ((52-87))
-------------TQLSNVATQPLVALNIAFSNTGLLALGVTDNLGDSLFANGQAKDATSFKESTSSWVPQFAGTG
General information:
TITO was launched using:
RESULT:
Template:
4W7J.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -196 for 124 contacts (-1.6/contact) +
2D Compatibility (PS) -3617 + (NN) 209 + (LL) 936
1D Compatibility (HY) -2400 + (ID) 700
Total energy: -5768.0 ( -46.52 by residue)
QMean score : 0.066
(partial model without unconserved sides chains):
PDB file :
Tito_4W7J.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4W7J-query.scw
PDB file :
Tito_Scwrl_4W7J.pdb
: