Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MHKILILLLIILPIKLLAVEIEIIADVNGEPISNLDIEKRINLTHSLFGTQSIDKNELKLQILKQLIDEIIIINEAQRLNIKLSDEELSNAVVLFLTQSFKLKDNEVDQYAKEHNIGLNILKRQIECQLLWDKIIEVRIVPFINISDKEVNNAKGQIEKPDYLITFQEFIIPNQKDADVYGIAEDLVEKLRNNNNDFIPEAPIKMRKVT---------VNLNQLKGNLKSILEGLKTGDIAGPVSSSEDYSIVKVIDKVQLDHAMLESTLKLKQIVVKDSESLLDNLKEQKVNCLNFDELADNFNLPNAKEFEIKMRDLNPDLQALFSKTSVNEIIESRENSTARLMMLCDIKNNVVDAEATKQQIYQQKIMTQSNLLLDNLRKNAAVSYQYS |
| 3GPK Chain:A ((25-103)) | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VFANAEKIVEQLKQGGS-FVAYARQYSEASTAAVGGDLGWIRLAQLPTELATTAASMGPGQLAGPVEIRGGFSILYLIDKREGHHHHHH------------------------------------------------------------------------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3GPK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -18804 for 406 contacts (-46.3/contact) +
2D Compatibility (PS) -7351 + (NN) -862 + (LL) 25904
1D Compatibility (HY) -5200 + (ID) 1150
Total energy: -7463.0 ( -18.38 by residue)
QMean score : 0.545
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