Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MISIFVEKGIVELKDENGTPISHKIIKHNIYPHIENKINVSLMEEDSNGKNLLVKGCCDISTIESLIKME
2C3D Chain:A ((396-456))
------EVSFLGMGEEEARAAGHEIVTIKMPPDTENGLNVALPASDRTMLYAFGKGTAHMSGFQKIVIDA
General information:
TITO was launched using:
RESULT:
Template:
2C3D.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -3868 for 313 contacts (-12.4/contact) +
2D Compatibility (PS) -6091 + (NN) 2044 + (LL) 912
1D Compatibility (HY) -2400 + (ID) 700
Total energy: -10103.0 ( -32.28 by residue)
QMean score : -0.070
(partial model without unconserved sides chains):
PDB file :
Tito_2C3D.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2C3D-query.scw
PDB file :
Tito_Scwrl_2C3D.pdb
: