Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKYTQLFISVIALVISLFAGYKVVKHQPQSVLNIKVAIIDSDKVINESLALHNIQQQIKEQNSKLQQEFENELDKLKPSKEELELLSEEAKKERAEQFNKLALNARDNYTKKMSY---LEESYRDAVDSVFNKIKEVAKKTAEKNNIDLVLFISKKNQVLYSMNEIDLSDVVLKNINKEIPEFTLKGVN |
1HNJ Chain:A ((214-291)) | ----------------------------------KVAVTELAHIVDETLAANNLDR--------------SQLDWLVPHQANLRIISATAKKLGMSMDNVVVTLDRHGNTSAASVPCALDEAVRDGRIKPGQLVLLEAFGGGFTWGSALVRF------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1HNJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 33137 for 441 contacts (75.1/contact) +
2D Compatibility (PS) -7844 + (NN) -3837 + (LL) 8144
1D Compatibility (HY) -3600 + (ID) 1200
Total energy: 24800.0 ( 56.24 by residue)
QMean score : 0.236
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