Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MINEEVVKENLKEVIERKSGKDVIALGIISSIVIKGKDIGFVLEISGDTQANEELRKNCEKAVKAIPGVGKVTVVAAGRKQAGQQRAKLHIEGVKNIIVVASGKGGVGKSTVALNLAFSLAKLKHKVALVDADIYGPSIPKMLGAEKLKPKIQGSRIIPIEKYGLHTISIGYFIDKDCAAMWRGPMITKALYNLLMGTKWSDIEYLVVDTPPGTGDVHLSLMENFNLTGGIIVSTPQELALVDARKIYNMFTKLSVPIFGIVENMSYFIQDNSKIYIFGKDGTKVMSEELGIKLLGRIPLDPKICYASDCGNPLMLSEDLAGIYEDFAKDIRSFI |
3VX3 Chain:A ((14-222)) | -----------------------------------------------------------------------------------------RLEGVKRIIPVVSGKGGVGKSLVSTTLALVLAEKGYRVGLLDLDFHGASDHVILGFEPKEFPEEDRGVVPPTVHGIKFMTIAYYT-----TPLRGKEISDALIELLTITRWDELDYLVIDMPPGLGDQLLDVLRFLKRGEFLVVATPSKLSLNVVRKLIELLKEEGHKVIGVVENMKL----R------EKDVEK-LAEEFGVPYLVGIPFYPDLDAKVGNVEELMKTEFAGKVRELAGRL----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3VX3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -156625 for 1634 contacts (-95.9/contact) +
2D Compatibility (PS) -21415 + (NN) -10382 + (LL) 8460
1D Compatibility (HY) -17600 + (ID) 3750
Total energy: -201312.0 ( -123.20 by residue)
QMean score : 0.480
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