Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTIIIDGKKIASGLCEKLSQRIDVLKREHSIFPCLKVIFVGNNPASQVYVRNKQKKAESIGISSETIVLPDNILENELIEKINELNNDRFVNGILVQLPLPNHINASKVINTVSVEKDVDAFHRENVGKLVKGEKNCLVPCTPKGALHLIKLVETNLSGKNAVVIGRSNIVGKPMFHLLLQENCTVTILHSQSKDLAEYCSKADVVVTAVGKPNFVQEGWIKEGAIVIDVGINSVSIEGKTKLIGDVDFDRVKEKTKAITPVPGGVGPMTIAFLMINTVIAACLQKKVDASDFVS
3P2O Chain:A ((6-280))
---LLDGKALSAKIKEELKEKNQFLKSK-GIESCLAVILVGDNPASQTYVKSKAKACEECGIKSLVYHLNENITQNELLALINTLNHDDSVHGILVQLPLPDHICKDLILESIISSKDVDGFHPINVGYLNLGLESGFLPCTPLGVMKLLKAYEIDLEGKDAVIIGASNIVGRPMATMLLNAGATVSVCHIKTKDLSLYTRQADLIIVAAGCVNLLRSDMVKEGVIVVDVGINRLE---SGKIVGDVDFEEVSKKSSYITPVPGGVGPMTIAMLLENTVKSAKNRL---------
General information:
TITO was launched using:
RESULT:
Template:
3P2O.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -196807 for 2362 contacts (-83.3/contact) +
2D Compatibility (PS) -29747 + (NN) -11169 + (LL) 1356
1D Compatibility (HY) -28400 + (ID) 6700
Total energy: -271467.0 ( -114.93 by residue)
QMean score : 0.596
(partial model without unconserved sides chains):
PDB file :
Tito_3P2O.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3P2O-query.scw
PDB file :
Tito_Scwrl_3P2O.pdb
: