Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIRGIGTDIVYIPRILRILQKYGKKFLNKIYTEQEIEISRKYNSQEMQAKYLAKRFAAKEAFVKALGGFSHGIIMKDIEIYNDVRGKPHLTVSKNFIFKDHMIHLSLSDDGDCATAFVIICSSLP
4DXE Chain:A ((25-141))
MIHGIGVDLIEIDRIQALYSKQ-PKLVERILTKNEQHKFNNFTHEQRKIEFLAGRFATKEAFSKALG-----VAFNDIDCYNDELGKPKID------YEGFIVHVSISHTEHYAMSQVVLEKS--
General information:
TITO was launched using:
RESULT:
Template:
4DXE.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -72760 for 800 contacts (-91.0/contact) +
2D Compatibility (PS) -12373 + (NN) -6157 + (LL) 152
1D Compatibility (HY) -9200 + (ID) 2050
Total energy: -102388.0 ( -127.99 by residue)
QMean score : 0.580
(partial model without unconserved sides chains):
PDB file :
Tito_4DXE.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4DXE-query.scw
PDB file :
Tito_Scwrl_4DXE.pdb
: