Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEVIAENRKARFEYFILEEFEAGMVLLSSEVKSLRERKVNISDAYVTEKNGEIWLHNMHIAEYKAANKKKHKPKRERKLLLHKKEINKLISQIKTAGVTIVPLSIYFNDKGLVKTRIAIVKGKKLYDKRATIKQREWNRAKSRLSKNNL
1J1H Chain:A ((1-123))
MAPVLENRRARHDYEILETYEAGIALKGTEVKSLRAGKVDFTGSFARFEDGELYLENLYIAPYEKGSYANVDPRRKRKLLLHKHELRRLLGKVEQKGLTLVPLKIYFNERGYAKVLLGLARGK--------------------------
General information:
TITO was launched using:
RESULT:
Template:
1J1H.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -54095 for 965 contacts (-56.1/contact) +
2D Compatibility (PS) -13139 + (NN) -384 + (LL) 1892
1D Compatibility (HY) -11200 + (ID) 2650
Total energy: -79576.0 ( -82.46 by residue)
QMean score : 0.288
(partial model without unconserved sides chains):
PDB file :
Tito_1J1H.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1J1H-query.scw
PDB file :
Tito_Scwrl_1J1H.pdb
: