Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLFDCLIIFIIVVCIIISITRGFIKELCALMFLFLSAFLTANHYDFFTINYSKYFNSKAMQNIFSTISVFIIFNLIFMIVNNWLMYILTPIRLGLIDRVTGTFVGALRGVLLSYVLFFAMHLYCYTVHDKKEEQSKIEAEDILPNWIINSYSYQALFATVEDIVDVYVPESLILKIKEIGEGMANQEKLKGDKKEE |
| 1HGV Chain:A ((13-42)) | ----------------TNYIQAIAAAGVGVLALAIGLSAAWKYAKRFLKG-------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1HGV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -9089 for 128 contacts (-71.0/contact) +
2D Compatibility (PS) -3226 + (NN) -2756 + (LL) 15148
1D Compatibility (HY) 800 + (ID) 50
Total energy: 827.0 ( 6.46 by residue)
QMean score : -0.121
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