Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MFKGIITNIGTIINTTIRSNSDQIFHIK-AQNLSSIHEGDSIACSGVCLTVVDIIND-----IFTVQISQETMKVSNLGAWKVGKKINLEQAMRLSDKIDGHLVHGHVDETAKILTINQNLGSHEIKLSCPQELIKFVAKKGSVTLDGVSLTVNSVIGREFTVNIIPYTWQNTTFQYNKVNDYLNLEVDMIARYLDQLIQYKYN
4G6I Chain:A ((1-200))
MFTGIITDIGKV-DRVKPLNEGVLLRIETAYDPETIELGASIACSGVCLTVVALPEKGSNARWFEVEAWEEALRLTTISSWQSGRKINLERSLKLGDEMGGHLVFGHVDGQAEIVERKDEGDAVRFTLRAPEELAPFIAQKGSVALDGTSLTVNGVNANEFDVLLIRHSLEVTTWGERKAGDKVNIEIDQLARYAARLAQY---
General information:
TITO was launched using:
RESULT:
Template:
4G6I.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -110578 for 1492 contacts (-74.1/contact) +
2D Compatibility (PS) -20669 + (NN) 2131 + (LL) 280
1D Compatibility (HY) -16000 + (ID) 4150
Total energy: -148986.0 ( -99.86 by residue)
QMean score : 0.409
(partial model without unconserved sides chains):
PDB file :
Tito_4G6I.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4G6I-query.scw
PDB file :
Tito_Scwrl_4G6I.pdb
: