Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MISGYKNHDLETFDDIFDSVFKIVYFQDKQLHEILDSGEISKVLEILEIPHPSGKSFFLKEYLQKQVCRKKRAITQNSFRHFHTTIFSTTYKHFS
2ZXI Chain:A ((310-353))
---------------------KIVKFPDKERHQIFLEPEGLDTIEI----YPNGLSTSLPEEVQWEMYRSIPGLENVVLIRPAYAIEYDVVPPTE
General information:
TITO was launched using:
RESULT:
Template:
2ZXI.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 2399 for 172 contacts (13.9/contact) +
2D Compatibility (PS) -4305 + (NN) 215 + (LL) 1468
1D Compatibility (HY) -1600 + (ID) 900
Total energy: -2723.0 ( -15.83 by residue)
QMean score : -0.021
(partial model without unconserved sides chains):
PDB file :
Tito_2ZXI.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2ZXI-query.scw
PDB file :
Tito_Scwrl_2ZXI.pdb
: