Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKMVKGILCDWLGVTELQESQKIDAEQFQRIFSALKKWQEAQKVNTEQFEKVFSALEEKIGTEQFQSMQEYLNGLQKKFTGLEEKAGTLIETVGEQEKIMLTCCIIASVITLAAISFITFCIYQGVKSGRERQRSLSDISAQNLMNQTHQAQNFM |
3HD0 Chain:A ((1-57)) | -----------------------------MDYRQLHRWD----LPPEEAIKVQNELRKKIKLTPYEGEPEYVAGVDLSFPGKEEGLAVIVVLEYPSFKILEVVSERGEITFPYIPGLLAFREGPLFLKAWEKLRTKPDVVVFDGQGLAHPRKLGI |
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General information:
TITO was launched using:
| RESULT:
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Template: 3HD0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 9697 for 202 contacts (48.0/contact) +
2D Compatibility (PS) -5346 + (NN) 3583 + (LL) 3168
1D Compatibility (HY) 4000 + (ID) 200
Total energy: 14902.0 ( 73.77 by residue)
QMean score : 0.210
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