Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSSNNIIESFGRDQLENFINYKNKIGIGALDIALNSGNKKAIEVLKSYGADIENR-VDGESRLLRALKEGNIEKMELLLS
2XEE Chain:A ((40-100))
------------------VNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVNAKDKDGYTPLHLAAREGHLEIVEVLLK
General information:
TITO was launched using:
RESULT:
Template:
2XEE.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 908 for 429 contacts (2.1/contact) +
2D Compatibility (PS) -6909 + (NN) -4735 + (LL) 912
1D Compatibility (HY) -2800 + (ID) 1150
Total energy: -13774.0 ( -32.11 by residue)
QMean score : 0.461
(partial model without unconserved sides chains):
PDB file :
Tito_2XEE.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2XEE-query.scw
PDB file :
Tito_Scwrl_2XEE.pdb
: