Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MFLALPALFLWLLNWTLVKEIWRFNDLMQEAPEEERQLIIYRLVDTLP-FITQTTYDLSAVASVNLSVNKLI-EKYGENLSKDG----FYTQLNRENTTNIEGYIKQSNEFKAEEKSHALKCLGFINRIEDKFQDNCSKLTLKQADILY |
| 4K3V Chain:A ((223-308)) | --------------------IWEINTEKQGTPEQMRQAIEFVKKHKLKHLLVET------------------GEVYTDSIGKEGTKGDSYYKMMKSNIETVHGSM-------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4K3V.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 5678 for 273 contacts (20.8/contact) +
2D Compatibility (PS) -6404 + (NN) -1680 + (LL) 7200
1D Compatibility (HY) -2400 + (ID) 900
Total energy: 1494.0 ( 5.47 by residue)
QMean score : 0.068
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