Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAHIPVLLKEMLLQLSPQNGGIYVDATFGAGGYSKAILESAD-CKVYAIDRDKTVIKFYEDLNIKYPSRVKLFIEKFSNIRSILDSNSLEYLVEPSAVSKLSSIISSGIQKKNIWISASSTGVTPSNTVDGVVFDIGVSSMQLDDGDRGFSFLHDGPLDMRMDNSSHTNASTFVNALREEEIANTIYNYGGE-RHSRRIARAIVNARKKKTIKTTFELANIVRSV-----VFRGKSKIDPATRTFQAIRIWVNDELGELEKGIKAASEILNKNGKLIVVTFHSLEDRIVKTFFKSLCEPRSIDCKVFSLLNKKMIKASAEEVNANPRSRSAKLRAIQRLS |
| 1M6Y Chain:A ((10-296)) | --HIPVMVREVIEFLKPEDEKIILDCTVGEGGHSRAILEHCPGCRIIGIDVDSEVLRIAEEKLKEFSDRVSLFKVSYREADFLLKT--------------------LGIEK-----------------VDGILMDLGVSTYQLKGENRGFTFEREEPLDMRMDLESEVTAQKVLNELPEEELARIIFEYGEEKRFARRIARKIVENR---PLNTTLDLVKAVREALPSYEIRRRKRHF--ATKTFQAIRIYVNRELENLKEFLKKAEDLLNPGGRIVVISFHSLEDRIVKETFR--------NSKKLRILTEKPVRPSEEEIRENPRARSGRLRAAERI- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1M6Y.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -145054 for 2420 contacts (-59.9/contact) +
2D Compatibility (PS) -30151 + (NN) -10708 + (LL) 2720
1D Compatibility (HY) -26800 + (ID) 6300
Total energy: -216293.0 ( -89.38 by residue)
QMean score : 0.541
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