Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRDEDLELLKFYYEVGIDCTLTEGNEEKKVEKEKNSKAIQSPTIQAEVQKKEQQSMFPSDWIIEARKLASKCNSMDELRSAVKSFEGCEIKKTSTNTVFSDGNQSAKIMLVGEAPGANEDLKGIPFCGASGMLLDKMLSAI-NLDRTKVYISNTVFWRPPGNRKPTDLELDMCRPFVEKHIALISPHILILVGGISCYSLL----DNTKTISTLRGRFHTYTNQYLSYSITTAVIFHPAYLLRQPAQKRLAWEDLKKIREYLNSTNNCTGV
4ZBY Chain:A ((2-187))
------------------------------------------------------------------------DSLEKIKEEVISCKKCKLWQFRTNAVPGEGYPKAEIMFVGEAPGENEDKEGRPFVGAAGKLLTQMIKEILGLERDQVFITNVVKCRPPNNRDPEEDEITACSPYLDRQIDIIMPKIIVTLGRHSTKYIFSKMGENFSSITKVRGK--SYVWKYKEKEIIVFPTYHPAAALYNPNLRKILEEDFKKIRELAITPKR----
General information:
TITO was launched using:
RESULT:
Template:
4ZBY.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -110525 for 1494 contacts (-74.0/contact) +
2D Compatibility (PS) -19837 + (NN) -11038 + (LL) 6032
1D Compatibility (HY) -11600 + (ID) 3500
Total energy: -150468.0 ( -100.71 by residue)
QMean score : 0.567
(partial model without unconserved sides chains):
PDB file :
Tito_4ZBY.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4ZBY-query.scw
PDB file :
Tito_Scwrl_4ZBY.pdb
: