Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MFKSIFTFSFFTAVSRISGLIRDILIAMVVGATSLADVFFSSFRFASLFRAFFAERAFATSFVPLYSAESRDSKRAFNFASSVISITFIIVLNFCLIMQTFFSYMVQIFTPGFDQSKLALAVTLSRIMMPYIIFASIASLIGGMLQVKQHFASTAIAPIILNLCLIASLLVPYIKTPAHNLSIAVLIGGMLQLLLMLFGAYKLKAFFFFSMKLSNEVKLFFKRVIPAIINSCVIQISLWIDTIMASFIPNAVSYIYYADRLNQLPQGVVGTAIGTVLLPLISKQANDTENT-VKIQNRALNIGLMLIMPTTAAFIIIPNTILLTLFSYGKFDHYAVQQTAPTLIALSLSLPAFIINKVLLPTFFAKSNLKIPTIFSLACLGINVVLNLLLMNKYQHTGIAIATSISTWINSILLINYLTINKMYKANQVLLLNIAKILVATAVMSVALYVSSSLSAGLFFDRIFARVIYLAALVVLSAVIYFGTLYLMFMGDFKCTKL |
| 1NKZ Chain:B ((9-38)) | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------EELHKYVIDGTRVFLGLALVAHFLAFSATPWLH-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1NKZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -3211 for 103 contacts (-31.2/contact) +
2D Compatibility (PS) -3156 + (NN) -1570 + (LL) 44132
1D Compatibility (HY) 400 + (ID) 150
Total energy: 36445.0 ( 353.83 by residue)
QMean score : -0.210
|
|
|