Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIRKIRNLKGAYKIREFLEEKLKNIGDNIAASSVDDEDVGATTSSKKKKPATGKPTEQVILQIDDKLELGSKPDLRDSPRLS
2HKJ Chain:A ((244-269))
----INNLKRDYTIKEFLVNEFQSIGDTTADKILELAGLKPNKKVKNLTEEEITRLVETFKKYEDFRSPSADSLSVIGEDLI
General information:
TITO was launched using:
RESULT:
Template:
2HKJ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -3350 for 113 contacts (-29.6/contact) +
2D Compatibility (PS) -2822 + (NN) -1258 + (LL) 576
1D Compatibility (HY) -2800 + (ID) 650
Total energy: -10304.0 ( -91.19 by residue)
QMean score : 0.495
(partial model without unconserved sides chains):
PDB file :
Tito_2HKJ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2HKJ-query.scw
PDB file :
Tito_Scwrl_2HKJ.pdb
: