Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTIPEKMINLCYNSADSVSVEYSDVIVVKNLDPEQLEQYKSSSKLEFTLKFQNGKVEYKNSKVTLTIPEQLKNCKANGKSLLGDINEHFKDTDNEVVECL--VDK-IADGLKSFIINPEDLNVDGSSIINKDDDAPVQILDSTEYGGTTEEQLLIQGIVNNVVGTLAGIVEVPIGMATDWVWPQDQK |
1XAG Chain:A ((177-220)) | -------------------------------------------------------------------AEVYKHALLNGESATQDIEQHFK--DREILQSLNGMDKYIAKGIETKLDIVVADEKEQGVRKFLNLGHTFGHAVEYYHKIPHGHAVMVGIIYQFIVANALFDSKHDISHYIQYLIQLGYP |
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General information:
TITO was launched using:
| RESULT:
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Template: 1XAG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -1366 for 208 contacts (-6.6/contact) +
2D Compatibility (PS) -4387 + (NN) -1834 + (LL) 4840
1D Compatibility (HY) -2000 + (ID) 900
Total energy: -5647.0 ( -27.15 by residue)
QMean score : 0.500
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