Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEKLHDQKVTENLQDTPKKATIEGKDFEQSRQKETSVQTETQSSVNTGVRT-SQKPKSQAVSFSIGKGSTEKKSSNKPKSSEKGIVCLSHKKIKKKEGFLSLLKRFVKRVLEKHF
4AFX Chain:A ((99-164))
--------------------------------------TETQ--IKRGLHLQALKPTKPGLLPSLFKGLRETLSRNLELGLTQGSFAFIHKDFDVKETFFNLSKRYFDTECVPMN
General information:
TITO was launched using:
RESULT:
Template:
4AFX.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 10494 for 272 contacts (38.6/contact) +
2D Compatibility (PS) -6471 + (NN) -596 + (LL) 2548
1D Compatibility (HY) -2800 + (ID) 1100
Total energy: 2075.0 ( 7.63 by residue)
QMean score : 0.302
(partial model without unconserved sides chains):
PDB file :
Tito_4AFX.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4AFX-query.scw
PDB file :
Tito_Scwrl_4AFX.pdb
: