Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MWSRLVAMCCFCLLLTGVSSCSKRGVNAINKMNFVVKQMKEKRVFFDYDKSDISEAGADTLLDVMEVLQDDPNVKVTLIGHTDNRGSYEYNVALGARRADAAKNFMVS--CTPYLENRIKTASKGETEPLVYVADDSKNSKYEKEHAKNRRVEFSFSGMKK
4G4X Chain:A ((7-113))
---------------------------------------AKRVVHFDYDSSDLSTEDYQTLQAHAQFLMANANSKVALTGHTDERGTREYNMALGERRAKAVQNYLITSGVNP---QQLEAVSYGKEAPVNPGHDESA-------WKENRRVEINYE----
General information:
TITO was launched using:
RESULT:
Template:
4G4X.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -11408 for 775 contacts (-14.7/contact) +
2D Compatibility (PS) -11578 + (NN) -8108 + (LL) 4264
1D Compatibility (HY) -4400 + (ID) 2150
Total energy: -33380.0 ( -43.07 by residue)
QMean score : 0.511
(partial model without unconserved sides chains):
PDB file :
Tito_4G4X.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4G4X-query.scw
PDB file :
Tito_Scwrl_4G4X.pdb
: