Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMNFFQKLTGKFCNFFTFKGLFASDIAIDLGTANTLVYQKNQGIVLDEPSVVARIKEKGSYIPYAFGKKAKMMLGKTPGEIEAIRPLKDGVIADFKSAEEMLKYFIRSANTKLTVNKPNIIICVPSGSTPVERRAIQDAAESAGANEVFLIEEPMAAAIGAGLPVTEPEGSMVVDIGGGTTEVAIISLGGIVYSRSARVGGDIMDEAIRSYIRENHKLLIGETTAEKIKKSLGSASLPDENNKEWMMVKGRDLVSGMPKEMLLSEYQVAESLIEPVHQIISAIKTALESTPPELSSDIVDKGIVLSGGGGLLRNLGKVISETTKLPVHVADDPLCCVALGSGKVLENMDYFSHVLFKQD
1JCF Chain:A ((1-332))-------------------MLRKDIGIDLGTANTLVFLRGKGIVVNEPSVIAIDSTTGEILK--VGLEAKNMIGKTPATIKAIRPMRDGVIADYTVALVMLRYFINKAKGGMNLFKPRVVIGVPIGITDVERRAILDAGLEAGASKVFLIEEPMAAAIGSNLNVEEPSGNMVVDIGGGTTEVAVISLGSIVTWESIRIAGDEMDEAIVQYVRETYRVAIGERTAERVKIEIGNVFPSKENDELETTVSGIDLSTGLPRKLTLKGGEVREALRSVVVAIVESVRTTLEKTPPELVSDIIERGIFLTGGGSLLRGLDTLLQKETGISVIRSEEPLTAVAKGAGMVLDKVNILKKLQGAG-


General information:
TITO was launched using:
RESULT:

Template: 1JCF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		3D Compatibility (PKB) -178985 for 3005 contacts (-59.6/contact) +
2D Compatibility (PS) -36496 + (NN) -14866 + (LL) 1556
1D Compatibility (HY) -31600 + (ID) 8350
Total energy: -268741.0 ( -89.43 by residue)
QMean score : 0.547

(partial model without unconserved sides chains):
PDB file : Tito_1JCF.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1JCF-query.scw
PDB file : Tito_Scwrl_1JCF.pdb: