Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MENLAYKLIKVTEAAALAAYKLVGLGDEKKADQVAVDAMRTVLNSMEINGTIVIGEGERDKAPMLYVGEKVGTGNGPEIDIAVDPLEGTTICAHYKQSAMSVLAAAKKGDFLHAPDIYMEKIAIGKDLPIGVVSLKNSVEKNFDNLAQAKKCEVNDLTVTILKRERHNNLILKIRKLGARVKLIDDGDIAA--IVSLINGSHDIYIGIGGAPEGVLAAAALSSIGGQMEGRLIF-----DTHQSKE-------RAKILNIDDLEKIYSIKDMVKGESV-FIATGVTSGELVDGVKFGYNICSTSSLIMLHNKVIKLQTIQNLC |
| 2R8T Chain:A ((7-323)) | ---LAIEFSRVTESAALAGYKWLGRGDKNTADGAAVNAMRIMLNQVNIDGTIVIGEGEIAEAPMLYIGEKVGTGRGDAVDIAVDPIEGTRMTAMGQANALAVLAVGDKGCFLNAPDMYMEKLIVGPGAK-GTIDLNLPLADNLRNVAAALGKPLSELTVTILAKPRHDAVIAEMQQLGVRVFAIPDGDVAASILTCMPDSEVDVLYGIGGAPEGVVSAAVIRALDGDMNGRLLARHDVK---ENRRIGEQELARCKAMGI-EAGKVLRLGDMARSDNVIFSATGITKGDLLEGISRKGNIATTETL-LIRGKSRTIRRIQSIH |
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General information:
TITO was launched using:
| RESULT:
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Template: 2R8T.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -180036 for 2636 contacts (-68.3/contact) +
2D Compatibility (PS) -32872 + (NN) -15963 + (LL) 584
1D Compatibility (HY) -25600 + (ID) 6800
Total energy: -260687.0 ( -98.89 by residue)
QMean score : 0.587
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