Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMDLNKFTEKAKSLIQSAQMKALGTGHQVFMPEHLLKVMLEDESGLVQDLIGACGGNAQSISDAVNNAIKKFPIVKGPGSNSLQLSREVAKVFEDSIGMARRNKDSFVTVERLLQGLTAQKNDTVGKILAENGITPQKLNSVITEMRKGSSADSPNSEENLNAAKKYTKDVTELAMQGKLDPVIGRDEEIRRTMQVSLRRTKNNPVLIGEPGVGKTAIVEGLANRIVANDVPLGLHDAKVLALDLGALIAGTKFRGEFEERLKAVINELAKAEGKIILFIDELHTLVGAGATSGAMDASNLLKPALARGEIRCIGATTLDEYREHIEKDPALARRFQPVFISQPTETDTVSILRGLKERYEVHHGIRITDGAIIAAAMLSNRYITDRFLPDKAIDLIDEAASRVRIEMDSKPEIIDELERKIVQLKIESEVLKKERDENSKQRLKKINEEIENLNSKFTDLNSKWQMEKNKIARIQETAEKLDNARKELELAQRSGKLEKAGELMYGVIPHLENELMNQEKVTDSFLKKEVTEDDIANIVSKWTGIPVDNMMHSEKEKLLSMENEIGKRVIGQKDAIEAISNAVRRSRSGVQDTNRPFGSFLFLGPTGVGKTELAKALAEFLFDDQSALLRFDMSEYMEKHSVSKLIGAPPGYVGYEQGGRLTEAVRRRPYQVILFDEIEKANPDIFNLLLQILDEGRLTDSHGKLIDFRNTILILTSNLGAEIMLKGVA-----DFVKSEVMQIVKSAFRPEFLNRLDEIIIFHSLTKDDIYKIIDVQFLYLQKIIVKRKLSISLSQEAKELIAQAGYDPEYGVRPLKRVIQECIQNNLAKLVLSGEVAEGDKLIVYAFNNEILVKKV
4LJ4 Chain:A ((5-322))------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------EVTEEDIAEIVSRWTGIPVSKLLEGE-EKLLRLEEELHKRVVGQDEAIRAVADAIRRARAGLKDPNRPIGSFLFLGPTGVGKTELAKTLAATLFDTEEAMIRIDMTEYMEKHAVSRLIG------------QLTEAVRRRPYSVILFDEIEKAHPDVFNILLQILDDGRLTDSHGRTVDFRNTVIILTSNLGSPLILEGLQKGWPYERIRDEVFKVLQQHFRPEFLNRLDEIVVFRPLTKEQIRQIVEIQLSYLRARLAEKRISLELTEAAKDFLAERGYDPVFGARPLRRVIQRELETPLAQKILAGEVKEGDRVQVDVGPAGLVFAVP


General information:
TITO was launched using:
RESULT:

Template: 4LJ4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		3D Compatibility (PKB) -211166 for 2293 contacts (-92.1/contact) +
2D Compatibility (PS) -32704 + (NN) -16273 + (LL) 37616
1D Compatibility (HY) -37200 + (ID) 9000
Total energy: -268727.0 ( -117.19 by residue)
QMean score : 0.628

(partial model without unconserved sides chains):
PDB file : Tito_4LJ4.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4LJ4-query.scw
PDB file : Tito_Scwrl_4LJ4.pdb: